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Biblioteca(s): |
Embrapa Mandioca e Fruticultura. |
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Data corrente: |
11/10/2018 |
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Data da última atualização: |
11/10/2018 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
ALBUQUERQUE, H. Y. G. de; CARMO, C. D. do; BRITO, A. C.; OLIVEIRA, E. J. de. |
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Afiliação: |
HILÇANA YLKA GONÇALVES DE ALBUQUERQUE, UFRB; CATIA DIAS DO CARMO, UFRB; ANA CARLA BRITO; EDER JORGE DE OLIVEIRA, CNPMF. |
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Título: |
Genetic diversity of Manihot esculenta Crantz germplasm based on single-nucleotide polymorphism markers. |
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Ano de publicação: |
2018 |
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Fonte/Imprenta: |
Annals Applied Biology, p. 1-14, 2018. |
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Idioma: |
Inglês |
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Conteúdo: |
Cassava (Manihot esculenta Crantz) is a species whose natural diversity has great food, industrial and energy potential. This study aimed to evaluate the genetic diversity, and population structure of 1,580 accessions belonging to the international germplasm conserved in Brazil using 20,601 single?nucleotide polymorphism markers. The average values of polymorphic information content (PIC), inbreeding (f), observed heterozygosity (Ho) and expected heterozygosity (He) were 0.24, 0.21, 0.23 and 0.30, respectively, presenting levels of genetic diversity compatible with the nature of the marker (predominantly biallelic) and with the species reproductive system. The mean values of He, Ho, PIC and f were similar for the 18 chromosomes of the species. At the individual level, f values ranged from 0.49 to 0.97, with an average of 0.69, whereas some cassava accessions showed f?>?0.90. The values of linkage disequilibrium ranged from 15 to 20?kb (r2?=?0.20). In the discriminant analysis of principal components (DAPC), 22 groups were formed with probabilities of assignment of individuals above 0.99. No association was observed between DAPC grouping and clusters based on phenotypic data (cyanogenic compound content and colour of the root pulp) and on genetic and geographic origin. However, the DAPC grouping resulted in greater variation between groups (14.85%). This information suggests extensive exchange of cassava germplasm in Brazil and wide molecular and phenotypic diversity. These results will provide a better understanding of the preserved genetic variability and the population organisation of the germplasm. MenosCassava (Manihot esculenta Crantz) is a species whose natural diversity has great food, industrial and energy potential. This study aimed to evaluate the genetic diversity, and population structure of 1,580 accessions belonging to the international germplasm conserved in Brazil using 20,601 single?nucleotide polymorphism markers. The average values of polymorphic information content (PIC), inbreeding (f), observed heterozygosity (Ho) and expected heterozygosity (He) were 0.24, 0.21, 0.23 and 0.30, respectively, presenting levels of genetic diversity compatible with the nature of the marker (predominantly biallelic) and with the species reproductive system. The mean values of He, Ho, PIC and f were similar for the 18 chromosomes of the species. At the individual level, f values ranged from 0.49 to 0.97, with an average of 0.69, whereas some cassava accessions showed f?>?0.90. The values of linkage disequilibrium ranged from 15 to 20?kb (r2?=?0.20). In the discriminant analysis of principal components (DAPC), 22 groups were formed with probabilities of assignment of individuals above 0.99. No association was observed between DAPC grouping and clusters based on phenotypic data (cyanogenic compound content and colour of the root pulp) and on genetic and geographic origin. However, the DAPC grouping resulted in greater variation between groups (14.85%). This information suggests extensive exchange of cassava germplasm in Brazil and wide molecular and phenotypic diversity. These r... Mostrar Tudo |
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Thesagro: |
Mandioca. |
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Thesaurus Nal: |
Cassava; Population structure; Variability. |
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Categoria do assunto: |
-- |
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Marc: |
LEADER 02240naa a2200205 a 4500
001 2097243
005 2018-10-11
008 2018 bl uuuu u00u1 u #d
100 1 $aALBUQUERQUE, H. Y. G. de
245 $aGenetic diversity of Manihot esculenta Crantz germplasm based on single-nucleotide polymorphism markers.$h[electronic resource]
260 $c2018
520 $aCassava (Manihot esculenta Crantz) is a species whose natural diversity has great food, industrial and energy potential. This study aimed to evaluate the genetic diversity, and population structure of 1,580 accessions belonging to the international germplasm conserved in Brazil using 20,601 single?nucleotide polymorphism markers. The average values of polymorphic information content (PIC), inbreeding (f), observed heterozygosity (Ho) and expected heterozygosity (He) were 0.24, 0.21, 0.23 and 0.30, respectively, presenting levels of genetic diversity compatible with the nature of the marker (predominantly biallelic) and with the species reproductive system. The mean values of He, Ho, PIC and f were similar for the 18 chromosomes of the species. At the individual level, f values ranged from 0.49 to 0.97, with an average of 0.69, whereas some cassava accessions showed f?>?0.90. The values of linkage disequilibrium ranged from 15 to 20?kb (r2?=?0.20). In the discriminant analysis of principal components (DAPC), 22 groups were formed with probabilities of assignment of individuals above 0.99. No association was observed between DAPC grouping and clusters based on phenotypic data (cyanogenic compound content and colour of the root pulp) and on genetic and geographic origin. However, the DAPC grouping resulted in greater variation between groups (14.85%). This information suggests extensive exchange of cassava germplasm in Brazil and wide molecular and phenotypic diversity. These results will provide a better understanding of the preserved genetic variability and the population organisation of the germplasm.
650 $aCassava
650 $aPopulation structure
650 $aVariability
650 $aMandioca
700 1 $aCARMO, C. D. do
700 1 $aBRITO, A. C.
700 1 $aOLIVEIRA, E. J. de
773 $tAnnals Applied Biology, p. 1-14, 2018.
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Embrapa Mandioca e Fruticultura (CNPMF) |
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| Registros recuperados : 21 | |
| 5. |  | ALVES, L. B.; CARMO, C. D. do; OLIVEIRA, E. J. de. Uso da técnica TRAP (Target Region Amplification Polymorphism) para análises genéticas em mandioca. In: JORNADA CIENTÍFICA EMBRAPA MANDIOCA E FRUTICULTURA, 8., 2014, Cruz das Almas, Ba. Pesquisa: despertando mentes para a inovação e transformando o futuro :[anais]. Cruz das Almas, Ba, Embrapa Mandioca e Fruticultura, 2014.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Mandioca e Fruticultura. |
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| 12. | | ALVES, L. B.; ALBUQUERQUE, H. Y. G. de; CARMO, C. D. do; BRITO, A. C.; OLIVEIRA, E. J. de. Identificação molecular de duplicatas de acessos de mandioca com uso de marcadores SNP pertencentes ao cromossomo 1. In: JORNADA CIENTÍFICA EMBRAPA MANDIOCA E FRUTICULTURA, 10., 2016: Cruz das Almas, BA. Traduzindo ciência para o mundo : resumos. Brasília, DF : Embrapa, 2016.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Mandioca e Fruticultura. |
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| 14. | | SANTOS, L. F. dos; OLIVEIRA, E. J. de; CARMO, C. D. do; PEREIRA, J. dos S.; RAMOS, A. P. de S.; BARBOSA, A. C. O. Geração de mutantes de mandioca com uso de agentes químicos In: JORNADA CIENTÍFICA EMBRAPA MANDIOCA E FRUTICULTURA, 17., 2017 Ciência e Empreendedorismo : resumos. Cruz das Almas, BA: Embrapa Mandioca e Fruticultura, 2017. 137p. 1p. Recursos Genéticos| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Mandioca e Fruticultura. |
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| 15. | | BARBOSA, A. C. O.; OLIVEIRA, P. H. G. A. de; CARMO, C. D. do; QUEIROZ, I. dos S.; OLIVEIRA, E. J. de; FERREIRA, C. F. Seleção assistida por marcadores moleculares para obtenção de indivíduos endogâmicos em populações segregantes de mandioca. In: JORNADA CIENTÍFICA EMBRAPA MANDIOCA E FRUTICULTURA, 17., 2017 Ciência e Empreendedorismo : resumos. Cruz das Almas, BA: Embrapa Mandioca e Fruticultura, 2017. 137p. 1p. Biotecnologia| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Mandioca e Fruticultura. |
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| 17. | | PEREIRA, J. dos S.; OLIVEIRA, E. J. de; CARMO, C. D. do; SANTOS, L. F. dos; ALBUQUERQUE, H. G. de; DIAMANTINO, M. S. A. S. Identificação de duplicatas de acessos de Mandioca (Manihot esculenta Crantz) com uso de dados morfológicos In: JORNADA CIENTÍFICA EMBRAPA MANDIOCA E FRUTICULTURA, 17., 2017 Ciência e Empreendedorismo : resumos. Cruz das Almas, BA: Embrapa Mandioca e Fruticultura, 2017. 137p. 1p. Recursos Genéticos| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Mandioca e Fruticultura. |
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| 20. | | BARBOSA, A. C. O.; OLIVEIRA, P. H. G. A. de; CARMO, C. D. do; ALVES, L. B.; SANTOS, D. B. dos; QUEIROZ, I. dos S.; OLIVEIRA, E. J. de; FERREIRA, C. F. Seleção assistida em progênie S1 para obtenção de linhagens por marcadores microssatélites. In: JORNADA CIENTÍFICA EMBRAPA MANDIOCA E FRUTICULTURA, 10., 2016: Cruz das Almas, BA. Traduzindo ciência para o mundo : resumos. Brasília, DF : Embrapa, 2016.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Mandioca e Fruticultura. |
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| Registros recuperados : 21 | |
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| Nenhum registro encontrado para a expressão de busca informada. |
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